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Table 2 Minor allelic frequency (MAF) of PTGS2 SNPs in Brazilians

From: Polymorphisms in regulatory regions of Cyclooxygenase-2 gene and breast cancer risk in Brazilians: a case-control study

SNP

Population

Alleles (N)

MAF (95%CI)

P χ2

rs689465 AG

  

rs689465 G

 
 

Total *

710

0.17 (0.14-0.20)

 
 

Men

222

0.20 (0.15-0.25)

0.273

 

Women

488

0.16 (0.13-0.19)

 
 

Whites

298

0.18 (0.14-0.22)

0.87

 

Intermediates

248

0.16 (0.11-0.20)

 
 

Blacks

164

0.16 (0.11-0.22)

 

rs689466 AG

  

rs689466 G

 
 

Total *

710

0.13 (0.10-0.15)

 
 

Men

220

0.16 (0.12-0.21)

0.221

 

Women

490

0.12 (0.09-0.15)

 
 

Whites

298

0.12 (0.08-0.16)

0.728

 

Intermediates

246

0.13 (0.09-0.17)

 
 

Blacks

166

0.15 (0.10-0.21)

 

rs20417 GC

  

rs20417 C

 
 

Total *

772

0.30 (0.27-0.33)

 
 

Men

242

0.28 (0.26-0.38)

0.783

 

Women

528

0.29 (0.25-0.33)

 
 

Whites

328

0.30 (0.25-0.35)

0.949

 

Intermediates

276

0.29 (0.23-0.34)

 
 

Blacks

168

0.31 (0.24-0.38))

 

rs5275 TC

  

rs5275 C

 
 

Total *

698

0.30 (0.26-0.33)

 
 

Men

208

0.29 (0.23-0.35)

0.882

 

Women

490

0.30 (0.26-0.34)

 
 

Whites

296

0.27 (0.22-0.32)

0.53

 

Intermediates

250

0.31 (0.25-0.36)

 
 

Blacks

154

0.34 (0.26-0.41)

 
  1. * Differences in values are due to missing data (no PCR amplification).
  2. P χ2: Chi-square test (Pearson P-value); 95%CI: 95% Confidence Interval