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Table 2 Potential CREB target genes.

From: Expression profile of CREB knockdown in myeloid leukemia cells

Gene Name

Fold Change

CREB binding

CREB site

Gene Name

Fold Change

CREB binding

CREB site

ACOX1

2.110674

2.911283

H ht

LDLR

1.678587

1.525499

ht

ADAT1

1.410234

3.769574

ht f h

LGALS3BP

2.131291

3.615437

none

APEH

1.400261

2.527266

h

LIM

1.696177

1.097432

none

APPBP2

1.486616

2.151867

H ht h

LIM

1.849989

1.097432

none

ARHB

2.758453

2.77377

H ht

LRRFIP1

1.941595

1.122307

h

ATP6V1A

1.446867

3.016595

HT ht h

METAP2

1.916632

2.635425

ht

BCL6

1.640646

6.084626

HT ht

METTL2

1.593867

3.474639

none

BDKRB2

1.600927

2.601219

none

MGC2731

1.588545

2.80081

HT h

BTN3A2

1.465264

3.426679

ht

MGC4054

1.502743

2.777966

ht

C20orf12

1.511854

3.12999

h

MOCS3

1.796255

5.213295

none

C20orf121

1.456022

3.532969

H

MRPS10

1.410471

1.834794

ht f

C20orf172

1.463616

4.659037

H h

NCOA3

1.495237

2.715807

ht

C20orf23

1.528396

2.622103

none

NDRG1

2.030896

2.312257

ht h

CD44

9.531947

1.335178

ht h

NEDF

1.567662

4.268912

ft ht

CDH12

3.296441

1.178959

none

NPR2L

1.618864

6.397355

ht h

CDKAL1

1.735322

3.445022

none

ODZ1

1.448279

2.310975

ht

CDKN1A

2.216725

1.778747

H ht h

OPA3

1.474233

7.631458

FHT ht h

CELSR3

1.546375

3.175919

H ht

OTC

1.693003

4.881484

ht

CENPF

1.415064

2.654622

ht

PAFAH2

1.67217

4.584628

none

CHRNB1

1.55045

1.412576

H h

PAFAH2

1.631066

4.584628

none

CLECSF2

1.747573

1.251667

none

PHC3

1.42261

1.747154

ht

CML2

1.47905

3.427882

ht

PHLDA1

3.92008

2.003171

h

COL15A1

2.56792

1.394566

none

PLAT

1.668223

1.95203

none

CREM

1.793497

3.67068

H

PLEKHB2

1.568395

4.611748

f

CRKL

1.690269

3.051845

H h

PPARGC1

2.268458

2.972107

HT F ht h

CSMD1

1.647116

1.61907

ht

PPFIBP1

1.852526

2.550633

ht h

CTMP

1.548763

3.386235

none

PPP1R10

1.870902

2.447557

H h

DBT

1.518604

4.292329

none

PPP1R3B

1.693114

1.622596

h

DCLRE1C

1.41992

3.010944

none

PSMAL/GCP

1.506527

2.707076

none

DDOST

1.582101

2.508459

ht

RAB7L1

1.638378

1.15364

ht h

DDX3X

1.817009

3.42975

none

RABL2B

1.486054

2.496157

h

DEGS

1.488221

1.464348

none

RASSF1

1.431271

4.04395

none

DIAPH1

1.412484

2.96506

none

RBL1

1.529652

2.451247

h

DUSP1

1.578824

2.102797

FT HT ht h

REL

1.944847

1.143935

H h

EGR2

5.148023

2.036633

HT ht h

RHOBTB3

1.63057

2.813465

none

EIF5

1.422558

4.208549

ht h

RIOK3

1.40951

2.008376

none

ELK1

1.405171

4.088789

ht

RNASE6PL

1.561704

2.252099

ht

ENC1

1.957151

1.549567

h

RNF32

1.954396

1.603905

H ht

F2R

1.804785

1.098488

ht h

SAS

1.768493

7.735178

HT ht h

FAM13A1

1.780869

2.014276

none

SERPINB9

2.244605

1.418097

ht h

FAT

2.00051

1.816506

F ht

SFPQ

1.477265

3.428149

ht

FKBP14

1.78994

3.042488

ht

SHARP

1.558516

1.078188

H ht

FLJ10781

1.463332

1.113364

ht h

SLC31A1

1.491104

3.803168

FH ht

FLJ10803

1.726196

2.63943

ht

SLC35E3

1.716026

1.969928

ht

FLJ11029

1.422001

3.085667

ht h

SLC38A2

1.497716

1.914154

H ht

FLJ11151

2.413055

1.840398

h

SLC39A6

1.477678

3.119807

h

FLJ20507

1.730068

2.922871

H ht h

SMA3

1.414595

2.654203

ht

FOSL1

2.220086

1.929543

HT ht h

SMARCF1

1.537978

1.046929

none

FRSB

1.423607

2.982919

ht

SNAP29

1.521481

2.454502

h

FXC1

1.423019

5.02095

HT H ht

SON

1.42477

4.933417

H

GALNS

1.772331

2.592543

h

SPG4

1.413533

3.160161

none

GCA

1.690161

2.92801

H h

SUFU

1.661693

2.275704

ht h

GTF2H3

1.593421

10.587057

H

TAP1

1.435113

3.105625

H h

GYS1

1.418699

2.559154

h

TIGD6

1.772719

3.636168

h

HBS1L

1.475369

3.891767

ht

TIMP1

1.791155

1.848154

HT h

HIP1

1.537214

2.114631

ht h

TNFRSF21

1.498482

2.635088

ht

HLA-C

1.429002

3.2916

h

TP53AP1

1.527339

3.493111

ht h

HSPG2

1.708361

1.453039

none

TPM4

2.201468

1.33368

H ht

ICAM1

2.20462

1.198603

ht h

TRIM26

1.400065

6.12308

ht

ID1

1.521685

2.3068

FT ht

TSSC3

1.879281

2.01021

H ht h

IDS

1.508286

1.1848

h

TTF1

1.513382

3.461645

ht h

IER5

1.66867

2.847755

HT ht

TUBA3

1.481437

2.500545

none

IL10RA

1.64246

2.830231

f

U2AF1L1

2.758542

3.548509

ht

IL10RB

1.410005

1.192048

ht h

U5-116KD

2.223148

2.779884

h

IL1R1

1.812093

1.329947

ht

USP2

2.35423

3.920336

HT H h

IL6

1.980266

1.460112

HT ht

VPS4B

1.474465

6.693871

H ht

IL6ST

1.54702

3.418269

none

YME1L1

1.441837

1.843132

F ht h

INPP1

2.071508

1.550135

ht h

ZFP37

1.572207

4.659572

ht h

ITGA5

2.028008

1.315131

none

ZNF142

1.50914

3.028386

h

JM4

1.606813

2.392743

HT h

ZNF155

1.69746

4.195939

none

KIAA0266

1.504796

2.986155

none

ZNF189

1.625836

4.104303

ht h

KIF14

1.453888

4.181899

none

ZNF221

1.777122

3.569536

none

KIF3B

1.623133

1.560467

none

ZNF324

1.488601

4.205703

h

LCMT2

1.587221

2.338943

H ht h

    
  1. Top up-regulated genes that show significant CREB binding and changes in expression in the CREB knockdown cells. The detailed criteria for selecting these genes are described in the methods section. The column descriptions are the same as in Table 1.
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