Knockdown type | # | Target seq (5' to 3') | Targets only NBPF1 | Exon type | |
---|---|---|---|---|---|
No | Yes | ||||
shRNA_19-mer | 1 | CCUCUUCUGCCACAAACGUUU | X | Â | 1 |
2 | GGAAUGUGCCAUCACUUGU | X | Â | 5 | |
3 | GGAAGUCCCUGAGGACUCA | X | Â | 6 | |
4 | GAAGAAGAUCAACGAAGAA | Â | X | 12 | |
5 | CUUACUUUGAUGGGAACAA | Â | X | 14 | |
shRNA_29-mer | 6 | UACCUCUUCUGCCACAAACGUCAGCAUGGU | X | Â | 1 |
7 | AUGUCAGGAUGCUGUAAACAUUCUCCCAG | Â | X | 5 | |
8 | AACAUCAACAUCACCUUUGAGGAAGACAA | Â | X | 5 | |
9 | UGACUCCAACCAGCCUCACAAGAACAUCA | X | Â | 5 | |
10 | GGAGAAGACGGUGUACCAGCCUCACAAGA | X | Â | 5 | |
11 | ACCAGUCUUACAGCGGCACAUUUCACUCA | Â | X | 8 | |
12 | CCUGACUCAUUCCAGCACUACAGAAGUGU | X | Â | 14 | |
13 | AGCUGGCAGAGAACAAACAGCAGUUCAGA | X | Â | 1 | |
14 | AUGCUGAGGAAUGAGCGACAGUUCAAGGA | X | Â | 2 | |
15 | UAAGGGAGAAGUUACGGGAAGGGAGAGAU | X | Â | 3 | |
16 | CUUCCUGGCCAACCAGCAGAACAAAUACA | X | Â | 1 | |
siRNA pool | 17 | GAAUCGUACUGCUAAGAAU | Â | X | 5' UTR |
ACAGAGACAGACAAAGAUA | X | Â | 5' UTR | ||
GAUGGCCAAUCUUUCCUAA | X | Â | 5' UTR | ||
GCAAGUCCAGGUCAUACUG | X | Â | 5' UTR |