Pathway/Gene set name | P-value | FDR | Significant genes/Selected genes/All genes |
---|---|---|---|
GSEA4GWAS Biological Process results for the Additive OS model | |||
INDUCTION OF APOPTOSIS BY EXTRACELLULAR SIGNALS | < 0.001 | 0.01 | 9/21/27 |
MITOSIS | < 0.001 | 0.02 | 23/68/82 |
M PHASE | < 0.001 | 0.02 | 31/96/114 |
M PHASE OF MITOTIC CELL CYCLE | < 0.001 | 0.04 | 23/70/85 |
NEGATIVE REGULATION OF DEVELOPMENTAL PROCESS | 0.001 | 0.05 | 36/148/197 |
ANTI APOPTOSIS | < 0.001 | 0.05 | 20/83/118 |
CHROMOSOME SEGREGATION | 0.003 | 0.1 | 10/29/32 |
CELL CYCLE PHASE | 0.001 | 0.13 | 38/144/170 |
CELL CYCLE PROCESS | < 0.001 | 0.19 | 42/160/193 |
REGULATION OF MITOSIS | 0.004 | 0.19 | 11/36/41 |
VASCULATURE DEVELOPMENT | 0.007 | 0.24 | 14/43/55 |
SKELETAL DEVELOPMENT | 0.011 | 0.25 | 23/80/103 |
GAMETE GENERATION | 0.011 | 0.25 | 18/76/114 |
NEGATIVE REGULATION OF APOPTOSIS | 0.008 | 0.25 | 21/112/150 |
NEGATIVE REGULATION OF PROGRAMMED CELL DEATH | 0.008 | 0.25 | 21/112/151 |
GSEA4GWAS Cannonical Pathways results for the Additive OS model | |||
PENTOSE PHOSPHATE PATHWAY | < 0.001 | 1.67E-03 | 8/19/25 |
GLUCONEOGENESIS | < 0.001 | 2.00E-03 | 18/47/53 |
GLYCOLYSIS | < 0.001 | 2.00E-03 | 18/47/53 |
HSA00030 PENTOSE PHOSPHATE PATHWAY | < 0.001 | 0.01 | 8/21/26 |
ST GA13 PATHWAY | < 0.001 | 0.02 | 11/29/37 |
NO1PATHWAY | < 0.001 | 0.03 | 11/26/31 |
HSA04210 APOPTOSIS | 0.001 | 0.03 | 19/68/84 |
HSA00010 GLYCOLYSIS AND GLUCONEOGENESIS | 0.001 | 0.03 | 17/58/64 |
ST TUMOR NECROSIS FACTOR PATHWAY | < 0.001 | 0.04 | 7/20/29 |
OVARIAN INFERTILITY GENES | 0.001 | 0.04 | 8/21/25 |
BILE ACID BIOSYNTHESIS | 0.002 | 0.04 | 9/23/27 |
KERATINOCYTEPATHWAY | 0.001 | 0.04 | 12/37/46 |
GLYCINE SERINE AND THREONINE METABOLISM | 0.006 | 0.05 | 9/28/37 |
BREAST CANCER ESTROGEN SIGNALING | 0.001 | 0.06 | 21/78/101 |
GLYCEROLIPID METABOLISM | 0.008 | 0.09 | 13/36/45 |
NOS1PATHWAY | 0.01 | 0.1 | 7/20/22 |
HSA00120 BILE ACID BIOSYNTHESIS | 0.003 | 0.11 | 11/36/38 |
HSA04330 NOTCH SIGNALING PATHWAY | 0.011 | 0.11 | 10/35/47 |
FRUCTOSE AND MANNOSE METABOLISM | 0.01 | 0.11 | 7/21/25 |
EGFPATHWAY | 0.009 | 0.11 | 8/24/27 |
HSA05218 MELANOMA | 0.01 | 0.11 | 13/58/71 |
ST JNK MAPK PATHWAY | 0.011 | 0.12 | 10/33/40 |
PDGFPATHWAY | 0.011 | 0.12 | 8/24/27 |
TYROSINE METABOLISM | 0.015 | 0.12 | 8/24/32 |
HSA05223 NON SMALL CELL LUNG CANCER | 0.009 | 0.12 | 13/47/54 |
HSA00760 NICOTINATE AND NICOTINAMIDE METABOLISM | 0.019 | 0.14 | 7/20/24 |
HSA00051 FRUCTOSE AND MANNOSE METABOLISM | 0.013 | 0.14 | 10/35/42 |
BUTANOATE METABOLISM | 0.017 | 0.14 | 7/26/29 |
HSA00260 GLYCINE SERINE AND THREONINE METABOLISM | 0.018 | 0.15 | 8/36/45 |
HSA00561 GLYCEROLIPID METABOLISM | 0.022 | 0.19 | 15/49/58 |
STRIATED MUSCLE CONTRACTION | 0.023 | 0.2 | 11/31/39 |
PPARAPATHWAY | 0.023 | 0.2 | 11/43/57 |
HSA04510 FOCAL ADHESION | 0.015 | 0.2 | 53/171/200 |
G1PATHWAY | 0.04 | 0.21 | 4/22/28 |
HSA05222 SMALL CELL LUNG CANCER | 0.024 | 0.21 | 22/78/87 |
HSA05010 ALZHEIMERS DISEASE | 0.029 | 0.21 | 7/23/28 |
HIVNEFPATHWAY | 0.029 | 0.22 | 13/46/58 |
HSA04662 B CELL RECEPTOR SIGNALING PATHWAY | 0.041 | 0.23 | 15/57/64 |
HSA05214 GLIOMA | 0.035 | 0.24 | 14/56/64 |
NFATPATHWAY | 0.039 | 0.24 | 11/46/53 |